.Uluslararası hakemli dergilerde yayımlanan makaleler A1. A.Copur Cicek, A. Saral, M. Iraz, A. Ceylan, A.Ozad Duzgun, A. Y.Peleg , C.Sandalli.. OXA- and GES-type β-lactamases Predominate in Extensively Drug-resistant Acinetobacter baumannii Isolates from a Turkish University Hospital. Clin Microbiol Infect 2014; 20: 410–415 10.1111/1469-0691.12338. A2. A.Copur Cıcek, A.Saral, A.Ozad Duzgun, E.Yasar, Z.Cızmecı, P.O. Balcı, F.Sarı, M.Fırat, Y.Ay Altıntop, S.Ak, A.Çalıskan, N.Yıldız, M.Sancaktar, E.E.Budak, A.Erturk, O.B.Ozgumus OB, C.Sandallı. Nationwide Study of Escherichia coli Producing Extended-Spectrum β-Lactamases TEM, SHV and CTX-M in Turkey". The Journal of Antibiotics (2013), 1–4. doi:10.1038/ja.2013.72 A3. A.Copur Cicek, A.Ozad Duzgun, A.Saral, C.Sandalli. Determination of a novel integron-located variant (blaOXA -320 ) of Class D β-lactamase in Proteus mirabilis. J Basic Microbiol. 2013 Sep 11. 53, 1–6. doi: 10.1002/jobm.201300264. A4. A.Çopur Çiçek, A.Ozad Düzgün, A.Saral, T. Kayman, Z.Çizmeci, P.Ö.Balcı, T.Dal, M.Fırat, İ. Tosun, Y.Ay Altıntop, A.Çalışkan, Y.Yazıcı, C.Sandallı. Detection of class 1 integron in Acinetobacter baumannii isolates collected from nine hospitals in Turkey. Asian Pac J Trop Biomed. 2013 Sep;3(9):743-7. doi: 10.1016/S2221-1691(13)60149-5. A5.A.Copur Cicek, A. Karagoz, E. Koksal, A. Erturk, O.B. Ozgumus, Z. Senturk Koksal, R. Durmaz. A Single Clone Acinetobacter baumannii Outbreak in a State Hospital in Turkey. Japanese Journal of Infectious Diseases, 2013;66(3):245-8. A6. A. Copur Cicek, O.B. Ozgumuş, A. Saral, C. Sandalli, "Antimicrobial resistance patterns and integron carriage of Escherichia coli isolates causing community-acquired infections in Turkey". Annals of Laboratory Medicine (ISI), http://dx.doi.org/10.3343/alm.2014.34.2.1. Ann Lab Med 2014;34:139-144. A7. A.Copur Cicek, A.Saral, A.Ozad Duzgun, Z.Cızmecı, T.Kayman, P. O. Balcı , T.Dal, M. Fırat, Y. Yazıcı, M.Sancaktar, O.B. Ozgumus, C.Sandallı. Screening of Class 1 and Class 2 Integrons in Clinical Iso-lates of Pseudomonas aeruginosa Collected from Seven Hospitals in Turkey: A Multicenter Study. Open Journal of Medical Microbiology, 2013, 3, 227-233. A8. A.Copur Cicek, İ.Sehitoglu, S.Eksi.Taenia infestation of the appendix : a case report ”. Southeast Asian Journal of Tropical Medicine and Public Health. (SEAMEO). November 2013; 44 ( 6): 959-962. Wos: 000329476100003 A9. C.Sandalli, A.Saral, S.Ülker, H.Karaoğlu, A.O.Beldüz, A.Copur Cicek. Cloning, expression and characterization of a novel ctp synthase gene from Anoxybacillus gonensis G2. Türk Biyoloji Derg Turk J Biol. (2014) 38: 111-117 doi:10.3906/biy-1304-76. A10. F.Z. Mengeloglu, A.Copur Cıcek, E.Kocoglu, T.Tas, O.Bucak, R.Guckan. Comparison of toxin genes in Staphylococcus aureus isolates obtained from patients and carriers. Acta Medica Mediterranea, 2013, 29: 659-664. A11. F.Z.Mengeloğlu, T.Taş, E. Koçoğlu, A.Çopur Çiçek, K.Yanık K, H.Güneş, İ.H.Çiftçi İH, S. Durmaz, Ö. Bucak, R.Güçkan, H.A.Terzi, Z.Yavuz. Seftarolinin MRSA İzolatlarına Etkinliği: Türkiye'den Çok Merkezli Bir Çalışma. Mikrobiyol Bul 2013; 47(4): 677-683. A12. A.N.Koç, A.Çopur Çiçek, L.Kaynar, H.Sav, F.F. Kasap Tekinşen, M.A.Atalay Blastoschizomyces capitatus Suşlarının Etken Olduğu Üç Fungemi Olgusu Mikrobiyol Bul 2013; 47(4): 734-741. A13. F.Duygu, N.Aksoy, A.Çopur Çiçek, İ. Butun, S.Unlu."Dose Prolidase Indicate Worsening Of Hepatitis B Infection ?"Journal of Clinical Laboratory Analysis 2013; 27: 398–401. A14.M. Cumhur Cure, E.Cure, A.Kirbas, A.Copur Cicek, S.Yuce. The effects of Gilbert's syndrome on the mean platelet volume and other hematological parameters. Blood Coagul Fibrinolysis. 2013; 24(5):484-8. doi: 10.1097/MBC.0b013e32835e4230. A15. Z.Simsek, I.Koruk, A.C.Copur, G.Gürses. Prevalence of Staphylococcus aureus and intestinal parasites among food handlers in Sanliurfa, Southeastern Anatolia. J Public Health Manag Pract. 2009;15(6):518-23. A16. M.S.Tekerekoglu, S.Ay, B.Otlu, A.Ciçek, U. Kayabaş, R.Durmaz. Molecular epidemiology of methicillin-resistant Staphylococcus aureus isolates from clinical specimens of patients with nosocomial infection: are there unnoticed silent outbreaks?New Microbiol. 2007; 30(2):131-7. A17. M.R.Bayraktar, E.Aktas, Y.Ersoy, A.Cicek, R.Durmaz. Postoperative Chryseobacterium indologenes bloodstream infection caused by contamination of distillate water.Infect Control Hosp Epidemiol. 2007;28(3):368-9. Doi: 10.1086/508839. A18. G.Yetkin, B.Otlu, A.Cicek, C.Kuzucu, R.Durmaz.Clinical, microbiologic, and epidemiologic characteristics of Pseudomonas aeruginosa infections in a University Hospital, Malatya, Turkey.Am J Infect Control. 2006;34(4):188-92.DOİ: doi:10.1016/j.ajic.2005.11.010 A19. M.S.Tekerekoglu, R. Durmaz, S.Ay, A. Ciçek, O.Kutlu. Epidemiologic and clinical features of a sepsis caused by methicillin-resistant Staphylococcus epidermidis (MRSE) in a pediatric intensive care unit.Am J Infect Control. 2004;32(6):362-4. doi:10.1016/j.ajic.2004.02.003. A.20. F.Z. Mengeloğlu, A.Çopur Çiçek, E. Koçoğlu , C.Sandallı, E. E. Budak, O. B.Özgümüş. Klinik Örneklerden İzole Edilen Pseudomonas aeruginosa ve Acinetobacter baumannii Suşlarının Sınıf 1 ve 2 İntegron Taşıyıcılığı ve Yeni Bir Gen Kaseti Birlikteliği: blaOXA-11 - cmlA7.Mikrobiol Bul 2014; 48(1): 48-58. A.21. Meryem Iraz, Azer Ozad Duzgun, Aysegul Copur Cicek, Rémy A. Bonnin, Aysenur Ceylan, Aysegul Saral, Patrice Nordmann, Cemal Sandalli. Characterization of novel VIM carbapenemase, VIM-38, and first detection of GES-5 carbapenem-hydrolyzing β-lactamases in Pseudomonas aeruginosa in Turkey. Diagnostic Microbiology and Infectious Disease. http://dx.doi.org/10.1016/j.diagmicrobio.2013.12.003.Diagn Microbiol Infect Dis. 2014 Mar;78(3):292-4. A.22. Ertürk AE, Cicek AC, Gümüs A, Cüre E, En A, Kurt A, Karagöz A, Aydogan N, Sandall C, Durmaz RZ. Molecular characterisation and control of Acinetobacter baumannii isolates resistant to multi-drug emerging in intensive care units. Ann Clin Microbiol Antimicrob. 2014 Jul 22;13(1):36. [Epub ahead of print] A.23. Halil Rakıcı, Remzi Adnan Akdogan, Recep Bedir, Aysegul Copur, Arif Yılmaz. Comparison of standard triple therapy, sequential therapy and moxifloxacin-based triple therapy for Helicobacterpylori infection: Patients’ compliance and bacterial eradication rates, Journal of Digestive Diseases 2014; 15; 508–513. A.24. Durmaz R, Kalaycioglu AT, Acar S, Bakkaloglu Z, Karagoz A, Korukluoglu G, Ertek M, Torunoglu MA, and the Turkish Rotavirus Surveillance Network. Prevalence of Rotavirus Genotypes inChildren Younger than 5 Years of Age before the Introduction of a Universal Rotavirus Vaccination Program: Report of Rotavirus Surveillance in Turkey. PLOS ONE DOI:10.1371/journal.pone.0113674 December 1, 2014. A.25. Dereci S, Çopur Çiçek A, Özkasap S, Mutlu MA, Kocyiğit S, Şahin K. Distribution of respiratory viruses which cause lower respiratory tract infection in pediatric age group. Journal of Coastal Life Medicine 2015; 3(7): 547-550. A.26. Dereci S, Çopur Çiçek A, Savaş Acar S, Bakkaloğlu Z, Özkasap S, Kanber K, Şadan Hacisalihoğlu Ş, Albayrak Y, Durmaz R. Prevalence and genotype distribution of rotaviruses in children with gastroenteritis in Rize province. The Bosnian Journal of Basic Medical Sciences DOI: http://dx.doi.org/10.17305/bjbms.2015.469. A.27. Ayse Erturk, Medine Cumhur Cure, Erkan Cure, Aysel Kurt, Aysegul Copur Cicek Suleyman Yuce. Clinical potential of resistin as a novel prognostic biomarker for cellulitis. Experimental and Therapeutic Medicine. 1875-1880 DOI: 10.3892/etm.2015.2311. Mayıs 2015.Volume 9 Issue 5. A.28. Iraz M., Duzgun A.O., Sandalli C. , Doymaz M.Z., Akkoyunlu Y., Saral A., Çiçek AÇ, "Distribution of ß-Lactamase Genes Among Carbapenem-Resistant Klebsiella pneumoniae Strains Isolated From Patients in Turkey", ANNALS OF LABORATORY MEDICINE, vol.35, pp.595-601, 2015 . A.29. Altindis M, Koroglu M, Demiray T, Dal T, Ozdemir M, Sengil AZ, Atasoy AR, Doğan M, Cicek AC, Ece G, Kaya S, Iraz M, Gultepe BS, Temiz H, Kandemir I, Aksaray S, Cetinkol Y, Sahin I, Guducuoglu H, Kilic A, Kocoglu E, Gulhan B, Karabay O. A Multicenter Evaluation of Blood Culture Practices, Contamination Rates, and the Distribution of Causative Bacteria. Jundishapur J Microbiol. 2016 Jan 2;9(1):e29766. doi: 10.5812/jjm.29766. A.30. Makena A, Düzgün AÖ, Brem J, McDonough MA, Rydzik AM, Abboud MI, Saral A, Çiçek AÇ, Sandalli C, Schofield CJ. Comparison of Verona Integron-Borne Metallo-β-lactamase Variants Reveals Differences in Stability and Inhibition Profiles. Antimicrob Agents Chemother March 2016 14;60(3):1377-84. doi: 10.1128/AAC.01768-15. A.31. Çopur Çiçek A, Sandallı C, Budak EE, Yağmur G, Çizmeci Z, Ak S, Balcı PÖ, Şay Coşkun SU, Ay Altıntop Y, Fırat M, Sarı F, Çalışkan A, Yıldız N, Sancaktar M, Özgümüş OB. İdrar Kültürlerinden İzole Edilen Escherichia coli Suşlarında Sınıf 1 ve Sınıf 2 İntegron Gen Kasetlerinin Karakterizasyonu: Çok Merkezli Bir Çalışma* Mikrobiyol Bul. 2016 Apr;50(2):175-85. A.32. Saral A, Leonard DA, Duzgun AO, Cicek AC, June CM, Sandalli C. Kinetic characterization of GES-22 β-lactamase harboring the M169L clinical mutation The Journal of Antibiotics (2016) 00, 1–5. doi:10.1038/ja.2016.48. A.33.Beriş FŞ, Akyildiz E, Özad Düzgün A, Say Coşkun US, Sandalli C, Çopur Çiçek A. A Novel Integron Gene Cassette Harboring VIM-38 Metallo-β-lactamase in a Clinical Pseudomonas aeruginosa Isolate.Ann Lab Med. 2016 Nov;36(6):611-3. doi: 10.3343/alm.2016.36.6.611. A.34.Aktaş E, Malkoçoğlu G, Otlu B, Çopur Çiçek A, Külah C, Cömert F, Sandallı C, Gürsoy NC, Erdemir D, Bulut ME. Evaluation of the Carbapenem Inactivation Method for Detection of Carbapenemase-Producing Gram-Negative Bacteria in Comparison with the RAPIDEC CARBA NP.Microb Drug Resist. 2016 Aug 30. doi:10.1089/mdr.2016.0092.Basım 2017. A.35.Aysegül Copur-Cicek, Rukiye Dinc-Patlak, Cemal Sandalli, Zafer Mengeloğlu, Ugur Kostakoglu, Ilknur Esen Yildiz. Determination of the staphylococcal cassette chromosome in methicillin-resistant Staphylococcus aureus strains isolated from various clinical samples. ISSN 2304-3415, Russian Open Medical Journal 2016. Volume 5. Issue 2. Article CID e0202 DOI: 10.15275/rusomj.2016.0202. A.36. Beriş FŞ, Budak EE, Gülek D, Uzun A, Çizmeci Z, Mengeloğlu FZ, Direkel Ş, Çetinkol Y, Ay Altıntop Y, Iraz M, Dal T, Say Coşkun SU, Balcı PÖ, Kayman T, Çalışkan A, Yazıcı Y, Tosun İ, Ertürk A, Çopur Çiçek A.Investigation of the frequency and distribution of beta-lactamase genes in the clinical isolates of Acinetobacter baumannii collected from different regions of Turkey: a multicenter study. Mikrobiyol Bul. 2016 Oct;50(4):511-521. A.37. Direkel Ş, Çopur Çiçek A, Karagöz A, Aydoğan Ejder N, Oktay E, Delialioğlu N, Özgümüş OB, Durmaz R.Antimicrobial susceptibility and molecular characterization of multidrug-resistant Acinetobacter baumannii isolated in an university hospital. Mikrobiyol Bul. 2016 Oct;50(4):522-534. A.38. Çetinkol Y,Sandallı C, ÇalgınMK,Yıldırım AA,Akyıldız E,Karaman E, Çopur Çiçek A. High prevalence of NDM metallo-β-lactamase among ESBL-producing Escherichia coliİsolates. Acta Microbiologica et Immunologica Hungarica 64 (2), pp. 131–141 (2017) DOI: 10.1556/030.63.2016.027. A.39. Emel Uzunoğlu, Direkel S, Kocbıyık M, Uludag SK, Copur Cicek A. Co-exıstance of ısaba1/blaOXA-51/23 ıs ıncreasıng in carbapenem resıstant Acınetobacter baumannıı ısolates ın Turkey. Acta Medica Mediterranea, 2017, 33: 1001 A.40. Serap Süzük, Hüsniye Şimşek, Nilay Çöplü, Zeynep Gülay, UAMDSS Çalışma Grubu. Ulusal Antimikrobiyal Direnç Sürveyans Sistemi (UAMDSS) Dış Kalite Değerlendirme Çalışmaları: 2011- 2016. Mikrobiyol Bul 2017; 51(3): 247-259. A.41.Umut Safiye Say Coskun, Aysegul Copur Cicek, Cetin Kilinc, Ridvan Guckan, Yelda Dagcioglu, Osman Demir, Cemal Sandallı. Effect of mazEF, higBA and relBE toxin-antitoxin systems on antibiotic resistance in Pseudomonas aeruginosa and Staphylococcus isolates. Malawi Medical Journal 30 (2): 67-72 June 2018. https://dx.doi.org/10.4314/mmj.v30i2.3. A.42. Songul Ozyurt, Yasin Yildiz, Ugur kostakoglu, Aysegul Copur-Cicek, İlknur Esen Yildiz, Ayse Erturk. Prognostic Value of Hematological Parameters. Journal of Clinical and Analytical Medicine. 1- 6. DOI: 10.4328/JCAM.5719 A.43. Umut Safiye Say Coskun, Emel Caliskan, Asegul Copur Cicek, Halbay Turumtay, Cemal Sandalli: "β-Lactamase Genes in Carbapenem Resistance Acinetobacter baumannii Isolates from a Turkish University Hospital, The Journal of Infection in Developing Countries. 2019 J Infect Dev Ctries 2019; 13(1):50-55. doi:10.3855/jidc.10556. A.44. Düzgün, Azer Özad; Okumuş, Funda; Saral, Ayşegül; Çiçek, Ayşegül Çopur;Cinemre S . Determination of antibiotic resistance genes and virulence factors in Escherichia coli isolated from Turkish patients with urinary tract infection .Rev Soc Bras Med Trop Vol.:52:e20180499, 2019 page:1- 5 doi: 10.1590/0037-8682-0499-2018. A.45. Ahmet Calıskan A, Copur Cicek A, Aydogan Ejder N, Karagoz A, Kirisci O. Antibiotic sensitivity of Stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with PFGE. J Infect Dev Ctries 2019, 13 (7): 634-639. Doi: 10.3855/jidc.11171. A.46. Songur C, Songur L, Copur Cicek A, Songur C, Top M. Correction of patient medical record errors through a file control method. Health Policy and Technology.8:(4).Page:329-336. doi.org/10.1016/j.hlpt.2019.08.010 A.47. Mehmet Kenan Kanburoglu, Ozgur Altuntas, Aysegul Copur Cicek.The Challenges of Contact Tracing in a Case of Early Neonatal Sepsis with COVID-19.Indian J Pediatr. 2020 Jun 22 : 1. doi: 10.1007/s12098-020-03400-1 [Epub ahead of print]. A.48. S Ozyurt, U Kostakoglu, IE Yildiz , A Erturk, E Sonmez , U Sahin, AC Cicek. Investigation of the Clonal Associations in Acinetobacter baumannii Strains Isolated from the Respiratory Samples of Patients in a Tertiary Research Hospital 2020. Nigerian Journal of Clinical Practice ¦ Volume 23 ¦ Issue 8. Page: 1155-1162. A. 49. Ayse Erturk *, Ugur Kostakoglu, Ilknur Esen Yildiz, Nur Hursoy, Sevda Ozdemir Al, Songul Ozyurt, Neslihan Ozcelik, Hatice Beyazal Polat, Aysegul Copur Cicek. Demographic, clinical and radiological features of healthcare workers and two index cases that were infected with COVID-19 (SARS-Cov-2). Doi: 10.19193/0393-6384_2020_6_600. 2020-MEDICA 6 - Acta Medica Mediterranea. PAGE: 3887-3896. A.50. Çopur Çiçek A, Ertürk A, Ejder N, Rakici E, Kostakoğlu U, Esen Yıldız İ, Özyurt S, Sönmez E. "Screening of Antimicrobial Resistance Genes and Epidemiological Features in Hospital and Community-Associated Carbapenem-Resistant Pseudomonas aeruginosa Infections". Infection and Drug Resistance 2021, 14:1517-1526. https://doi.org/10.2147/IDR.S299742 A.51. Çopur Çiçek A, Şemen V, Aydoğan Ejder N, Ulusan Gündoğdu DZ, Koçyiğit Kalcan S, Tufan Köse F, Osman Birol Özgümüş.Molecular Epidemiological Analysis of Integron gene cassettes and tet(A) - tet(B) - tet(D) Gene Association in Escherichia coli Strains Producing Extended-Spectrum BetaLactamase (ESBL) Growing in Urine Cultures. Advances in Clinical and Experimental Medicine (ACEM-06008-2021-03).